Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Gm7857-201ENSMUST00000117957 358 ntBASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Gm8731-201ENSMUST00000118088 412 ntBASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trub1Q8C0D0 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Gm15595-201ENSMUST00000120840 961 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trub1Q8C0D0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trub1Q8C0D0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Btrc-209ENSMUST00000224478 2194 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm15236-201ENSMUST00000117309 379 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm12217-201ENSMUST00000118858 696 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm3150-201ENSMUST00000166418 204 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Ntng1-201ENSMUST00000051253 327 ntBASIC11.89□□□□□ -0.51
Trub1Q8C0D0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms