Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm43058-201ENSMUST00000197645 625 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 Gm30946-201ENSMUST00000198288 724 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 Gm7600-201ENSMUST00000209657 785 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 AC134248.1-201ENSMUST00000216113 1176 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 AC164618.2-201ENSMUST00000224770 573 ntBASIC16.24■□□□□ 0.19
Usp47Q8BY87 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Usp47Q8BY87 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm7964-201ENSMUST00000051522 1378 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm6157-201ENSMUST00000199935 1897 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm4993-201ENSMUST00000118719 1174 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Mrip-ps-201ENSMUST00000184613 940 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm45594-201ENSMUST00000211717 241 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 AC154589.2-201ENSMUST00000228847 251 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Usp47Q8BY87 AC158636.1-201ENSMUST00000220118 1393 ntBASIC16.23■□□□□ 0.19
Usp47Q8BY87 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Gm45592-201ENSMUST00000209605 1043 ntBASIC16.22■□□□□ 0.19
Usp47Q8BY87 Hrc-202ENSMUST00000211327 607 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Mt1-202ENSMUST00000211807 1085 ntBASIC16.22■□□□□ 0.19
Usp47Q8BY87 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 AC166341.2-201ENSMUST00000220571 120 ntBASIC16.22■□□□□ 0.19
Usp47Q8BY87 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC16.22■□□□□ 0.19
Usp47Q8BY87 Gm9915-201ENSMUST00000066196 1383 ntBASIC16.22■□□□□ 0.19
Usp47Q8BY87 AC122811.1-201ENSMUST00000222257 2921 ntBASIC16.22■□□□□ 0.19
Usp47Q8BY87 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Usp47Q8BY87 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 133.6 ms