Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Usp1Q8BJQ2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm12419-201ENSMUST00000116649 636 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm44315-201ENSMUST00000203041 219 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm19091-201ENSMUST00000208120 978 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm23680-201ENSMUST00000083162 164 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.34□□□□□ -0.43
Usp1Q8BJQ2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp1Q8BJQ2 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp1Q8BJQ2 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp1Q8BJQ2 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Usp1Q8BJQ2 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm24398-201ENSMUST00000157870 109 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm44158-201ENSMUST00000203881 505 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm3793-201ENSMUST00000204973 672 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.33□□□□□ -0.44
Usp1Q8BJQ2 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms