Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.14□□□□□ -0.47
Ccdc40Q8BI79 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm22133-201ENSMUST00000102082 109 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm11660-201ENSMUST00000120955 412 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm26361-201ENSMUST00000158868 186 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gm5403-201ENSMUST00000117105 2795 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Dopey2-207ENSMUST00000227156 7340 ntBASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Ccdc40Q8BI79 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm28693-201ENSMUST00000189622 2638 ntBASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Slc5a8-201ENSMUST00000020255 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm7584-201ENSMUST00000175829 940 ntBASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm25700-201ENSMUST00000177693 110 ntBASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm9192-201ENSMUST00000183221 985 ntBASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Ccdc40Q8BI79 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc40Q8BI79 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms