Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Trim50Q810I2 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trim50Q810I2 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trim50Q810I2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Trim50Q810I2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Trim50Q810I2 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Trim50Q810I2 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Bahcc1-201ENSMUST00000044985 10726 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Gm14058-201ENSMUST00000116082 735 ntBASIC11.27□□□□□ -0.61
Trim50Q810I2 Gm7851-201ENSMUST00000117574 323 ntBASIC11.27□□□□□ -0.61
Trim50Q810I2 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.27□□□□□ -0.61
Trim50Q810I2 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Trim50Q810I2 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.27□□□□□ -0.61
Trim50Q810I2 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trim50Q810I2 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.26□□□□□ -0.61
Trim50Q810I2 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm12579-201ENSMUST00000118040 783 ntBASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm13263-201ENSMUST00000121271 838 ntBASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm38151-201ENSMUST00000195085 289 ntBASIC11.26□□□□□ -0.61
Trim50Q810I2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.26□□□□□ -0.61
Trim50Q810I2 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.26□□□□□ -0.61
Trim50Q810I2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trim50Q810I2 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Trim50Q810I2 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trim50Q810I2 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trim50Q810I2 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trim50Q810I2 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trim50Q810I2 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Trim50Q810I2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms