Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Ubr5Q80TP3 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm38145-201ENSMUST00000192319 693 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 AC164614.1-201ENSMUST00000216038 397 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ifna5-201ENSMUST00000102804 570 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm44420-201ENSMUST00000203669 490 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 AC123061.1-201ENSMUST00000228021 999 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 1110034G24Rik-201ENSMUST00000061891 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Rasgrp1-204ENSMUST00000173252 1750 ntTSL 5 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Mir3100-201ENSMUST00000174918 65 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm44908-201ENSMUST00000208610 266 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 AC174647.1-201ENSMUST00000227419 1271 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm23458-201ENSMUST00000083257 169 ntBASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Ubr5Q80TP3 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Gm38034-201ENSMUST00000193915 2069 ntBASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Gm4917-201ENSMUST00000121452 650 ntBASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ubr5Q80TP3 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms