Protein–RNA interactions for Protein: Q6PDM2

Srsf1, Serine/arginine-rich splicing factor 1, mousemouse

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srsf1Q6PDM2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Srsf1Q6PDM2 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm22661-201ENSMUST00000104192 132 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Mir453-201ENSMUST00000104732 82 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm15136-201ENSMUST00000120552 533 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm15610-201ENSMUST00000120584 195 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm14006-201ENSMUST00000122132 981 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm25569-201ENSMUST00000157175 131 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm25492-201ENSMUST00000157383 129 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm7765-201ENSMUST00000182585 974 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Mir7035-201ENSMUST00000184713 82 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm37207-201ENSMUST00000194284 296 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm2594-201ENSMUST00000214774 742 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 AC107752.1-201ENSMUST00000219362 469 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm26035-201ENSMUST00000083065 308 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Gm15519-201ENSMUST00000120088 1566 ntBASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Srsf1Q6PDM2 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 AC137842.1-201ENSMUST00000227896 2064 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm6158-201ENSMUST00000109467 904 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm11540-201ENSMUST00000117457 780 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm11544-201ENSMUST00000120215 382 ntBASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Srsf1Q6PDM2 Gm26174-201ENSMUST00000158415 219 ntBASIC10.03□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms