Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.7□□□□□ -0.38
Cln3Q61124 Gm37365-201ENSMUST00000193109 409 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 AC158392.3-201ENSMUST00000224271 1284 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cln3Q61124 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Cln3Q61124 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.7□□□□□ -0.38
Cln3Q61124 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Cln3Q61124 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Cln3Q61124 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Cln3Q61124 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Cln3Q61124 0610040B10Rik-203ENSMUST00000198455 1643 ntBASIC12.7□□□□□ -0.38
Cln3Q61124 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Cln3Q61124 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cln3Q61124 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Cln3Q61124 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.69□□□□□ -0.38
Cln3Q61124 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.69□□□□□ -0.38
Cln3Q61124 Gm11979-201ENSMUST00000119629 743 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Gm25545-201ENSMUST00000122673 323 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.69□□□□□ -0.38
Cln3Q61124 Gm25830-201ENSMUST00000158923 132 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Gm24809-201ENSMUST00000175318 271 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.69□□□□□ -0.38
Cln3Q61124 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cln3Q61124 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC12.69□□□□□ -0.38
Cln3Q61124 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC12.69□□□□□ -0.38
Cln3Q61124 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Cln3Q61124 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Gm8181-201ENSMUST00000062242 669 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cln3Q61124 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC12.69□□□□□ -0.38
Cln3Q61124 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Cln3Q61124 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cln3Q61124 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.68□□□□□ -0.38
Cln3Q61124 Gm12453-201ENSMUST00000121981 331 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Gm4982-201ENSMUST00000160440 1098 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Cln3Q61124 Gm44216-201ENSMUST00000203942 157 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Gm6423-201ENSMUST00000204315 934 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cln3Q61124 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cln3Q61124 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.68□□□□□ -0.38
Cln3Q61124 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms