Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm40689-201ENSMUST00000218006 362 ntTSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Zfp389-202ENSMUST00000224437 1234 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm11960-201ENSMUST00000122068 925 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm8464-202ENSMUST00000146697 1142 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm4750-201ENSMUST00000151942 1142 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm24466-201ENSMUST00000179978 109 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 AC102327.1-201ENSMUST00000226389 742 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.1□□□□□ -0.63
Col12a1Q60847 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC11.1□□□□□ -0.63
Col12a1Q60847 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Zfp419-201ENSMUST00000173446 916 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm37858-201ENSMUST00000192759 1231 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC11.09□□□□□ -0.63
Col12a1Q60847 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm29101-201ENSMUST00000188329 1471 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm5510-201ENSMUST00000117826 486 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm16480-201ENSMUST00000120439 832 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm36172-201ENSMUST00000219852 723 ntTSL 3 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Col12a1Q60847 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Rfc4-203ENSMUST00000115338 1279 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm15476-201ENSMUST00000118247 1191 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Gm7805-201ENSMUST00000154348 448 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Mir6396-201ENSMUST00000183603 111 ntBASIC11.09□□□□□ -0.63
Col12a1Q60847 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Col12a1Q60847 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm5191-201ENSMUST00000222882 1236 ntBASIC11.08□□□□□ -0.64
Col12a1Q60847 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.08□□□□□ -0.64
Col12a1Q60847 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Col12a1Q60847 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.08□□□□□ -0.64
Col12a1Q60847 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms