Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm18730-201ENSMUST00000218038 343 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm18065-201ENSMUST00000221395 526 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm10254-201ENSMUST00000052888 867 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm5537-201ENSMUST00000091117 1252 ntBASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.92□□□□□ -0.82
Trav5d-4Q5R1F6 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm5846-201ENSMUST00000193146 1414 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm13812-201ENSMUST00000118061 1347 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm13810-201ENSMUST00000118584 1347 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm44573-201ENSMUST00000191753 2370 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm6039-201ENSMUST00000121667 1250 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Gm43438-201ENSMUST00000198133 379 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 AC133602.1-201ENSMUST00000227510 509 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trav5d-4Q5R1F6 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trav5d-4Q5R1F6 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms