Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm25261-201ENSMUST00000157416 134 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm2546-201ENSMUST00000182630 991 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm5035-201ENSMUST00000215581 927 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 CU024892.2-201ENSMUST00000224608 832 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Zfp827-203ENSMUST00000119254 4549 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm37613-201ENSMUST00000195677 3580 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 AC091458.1-201ENSMUST00000220902 1361 ntBASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm19040-201ENSMUST00000203280 4726 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm43375-201ENSMUST00000196705 2480 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm5703-201ENSMUST00000186658 3973 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm12463-201ENSMUST00000118271 849 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm13316-201ENSMUST00000140537 691 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm9034-201ENSMUST00000182071 1005 ntBASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav15-1-dv6-1Q5R1D2 Gm38230-201ENSMUST00000193572 1159 ntBASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms