Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ddx49Q4FZF3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm8451-201ENSMUST00000170338 447 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm7741-201ENSMUST00000181445 989 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm43610-201ENSMUST00000199117 365 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm43912-201ENSMUST00000204352 538 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm6390-201ENSMUST00000215034 589 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm8894-201ENSMUST00000074642 666 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm7536-201ENSMUST00000077389 444 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm5453-201ENSMUST00000080866 447 ntBASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ddx49Q4FZF3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm7719-201ENSMUST00000182374 975 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm9192-201ENSMUST00000183221 985 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm18776-201ENSMUST00000188833 654 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm5870-201ENSMUST00000196461 282 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm43163-201ENSMUST00000196571 442 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm39288-201ENSMUST00000210554 446 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.5□□□□□ -0.25
Ddx49Q4FZF3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms