Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm9192-201ENSMUST00000183221 985 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm37466-201ENSMUST00000195692 652 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm21811-201ENSMUST00000096485 930 ntBASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Syne3Q4FZC9 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm11509-201ENSMUST00000117358 325 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm4909-201ENSMUST00000118749 794 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm27552-201ENSMUST00000183351 62 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm27844-201ENSMUST00000183613 62 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Syne3Q4FZC9 Gm43522-201ENSMUST00000196697 1922 ntBASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
Syne3Q4FZC9 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Cfap74-209ENSMUST00000151083 5487 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Gm2965-201ENSMUST00000198365 343 ntBASIC12.27□□□□□ -0.45
Syne3Q4FZC9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Gm10288-201ENSMUST00000084614 537 ntBASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Syne3Q4FZC9 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms