Protein–RNA interactions for Protein: Q3V0C5

Usp48, Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48Q3V0C5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Gm10152-201ENSMUST00000193475 1344 ntBASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp48Q3V0C5 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm19680-201ENSMUST00000095050 1513 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm15207-201ENSMUST00000119259 442 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm25604-201ENSMUST00000158359 133 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm42599-201ENSMUST00000201308 469 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm43852-201ENSMUST00000202098 917 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm44506-201ENSMUST00000206278 965 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp48Q3V0C5 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Mir671-201ENSMUST00000102432 98 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm12030-201ENSMUST00000121917 223 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 n-R5s84-201ENSMUST00000122591 109 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm22146-201ENSMUST00000157397 288 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 AC129308.3-201ENSMUST00000225652 524 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Lgi3-203ENSMUST00000226548 1001 ntBASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp48Q3V0C5 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Gm24791-201ENSMUST00000104284 131 ntBASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Gm18201-201ENSMUST00000174735 875 ntBASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Gm26134-201ENSMUST00000178484 110 ntBASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Gm44647-201ENSMUST00000207402 428 ntBASIC14.35□□□□□ -0.11
Usp48Q3V0C5 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp48Q3V0C5 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms