Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 AC167565.1-201ENSMUST00000226980 1833 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Gm12015-201ENSMUST00000117065 843 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Gm11511-201ENSMUST00000118146 540 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Gm10312-201ENSMUST00000078515 489 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim43aQ3TL54 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm13097-201ENSMUST00000210722 397 ntBASIC12.25□□□□□ -0.45
Trim43aQ3TL54 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm8712-201ENSMUST00000221090 701 ntBASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim43aQ3TL54 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Gm15236-201ENSMUST00000117309 379 ntBASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Gm11930-201ENSMUST00000117788 190 ntBASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim43aQ3TL54 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms