Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm4310-201ENSMUST00000177847 889 ntBASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm8343-201ENSMUST00000182705 994 ntBASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm4157-201ENSMUST00000211647 679 ntBASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Nhej1Q3KNJ2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm14071-201ENSMUST00000117817 509 ntBASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm10478-201ENSMUST00000084451 396 ntBASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Nhej1Q3KNJ2 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.28□□□□□ -0.44
Nhej1Q3KNJ2 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms