Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pkd1l3Q2EG98 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 4930506C21Rik-203ENSMUST00000130639 909 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm20495-201ENSMUST00000173902 235 ntBASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm28324-201ENSMUST00000187913 264 ntBASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm37826-201ENSMUST00000195329 322 ntBASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm15549-201ENSMUST00000121595 622 ntBASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pkd1l3Q2EG98 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm18059-201ENSMUST00000208073 580 ntBASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm7278-201ENSMUST00000119836 1401 ntBASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pkd1l3Q2EG98 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm14892-201ENSMUST00000117636 267 ntBASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm8531-201ENSMUST00000188319 893 ntBASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm8342-201ENSMUST00000209839 757 ntBASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm39288-201ENSMUST00000210554 446 ntBASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Pkd1l3Q2EG98 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms