Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ssr1-203ENSMUST00000225246 1825 ntBASIC10.32□□□□□ -0.76
Chd8Q09XV5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Chd8Q09XV5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm5510-201ENSMUST00000117826 486 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm37012-201ENSMUST00000194991 1078 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm25947-201ENSMUST00000180343 110 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Mir7051-201ENSMUST00000184167 73 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm37284-201ENSMUST00000193607 539 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm30619-201ENSMUST00000213962 686 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
Chd8Q09XV5 AC163646.3-202ENSMUST00000228685 691 ntBASIC10.31□□□□□ -0.76
Chd8Q09XV5 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Chd8Q09XV5 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm6238-201ENSMUST00000120999 465 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm12133-201ENSMUST00000121775 661 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm24597-201ENSMUST00000122503 300 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 9230111E07Rik-201ENSMUST00000124850 811 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Pard3bos3-201ENSMUST00000147177 862 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm9574-201ENSMUST00000173127 845 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm29266-201ENSMUST00000190392 600 ntTSL 3 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm4866-201ENSMUST00000197408 589 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm44323-201ENSMUST00000198689 129 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm45258-201ENSMUST00000210042 853 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm2696-201ENSMUST00000220062 723 ntAPPRIS P5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 AC130219.2-201ENSMUST00000228765 807 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm12047-201ENSMUST00000117561 944 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm9164-201ENSMUST00000118700 1014 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm15374-201ENSMUST00000119313 844 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm12464-201ENSMUST00000121385 1016 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm15258-201ENSMUST00000153801 741 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC10.3□□□□□ -0.76
Chd8Q09XV5 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm44640-201ENSMUST00000206894 247 ntBASIC10.3□□□□□ -0.76
Chd8Q09XV5 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms