Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxc4Q08624 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxc4Q08624 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxc4Q08624 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxc4Q08624 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxc4Q08624 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Hoxc4Q08624 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm8111-201ENSMUST00000117659 987 ntBASIC11.11□□□□□ -0.63
Hoxc4Q08624 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm15744-201ENSMUST00000161734 213 ntBASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm42816-201ENSMUST00000198433 325 ntBASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm30671-201ENSMUST00000214898 318 ntBASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 CT025602.2-201ENSMUST00000226553 772 ntBASIC11.11□□□□□ -0.63
Hoxc4Q08624 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Hoxc4Q08624 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.11□□□□□ -0.63
Hoxc4Q08624 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Hoxc4Q08624 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm10169-201ENSMUST00000121822 348 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm8492-201ENSMUST00000182375 987 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Mir6407-201ENSMUST00000184510 101 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm43058-201ENSMUST00000197645 625 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm18561-201ENSMUST00000206027 804 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.1□□□□□ -0.63
Hoxc4Q08624 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Hoxc4Q08624 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms