Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col9a1Q05722 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Mir704-201ENSMUST00000102106 77 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm14021-201ENSMUST00000117683 961 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm11446-201ENSMUST00000121319 866 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Zcwpw2-203ENSMUST00000187803 372 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Ints5-203ENSMUST00000191089 568 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm37365-201ENSMUST00000193109 409 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm37072-201ENSMUST00000194570 837 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Fkbp6-203ENSMUST00000201784 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm18010-201ENSMUST00000203553 202 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 AC123835.1-201ENSMUST00000214362 670 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm5655-201ENSMUST00000221078 901 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm40598-201ENSMUST00000222953 547 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 AC154747.1-201ENSMUST00000225265 239 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Olfr844-201ENSMUST00000054106 930 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 AU015228-201ENSMUST00000121103 1320 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.77□□□□□ -0.53
Col9a1Q05722 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col9a1Q05722 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Col9a1Q05722 Gm21759-201ENSMUST00000178345 1828 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Col9a1Q05722 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm12499-201ENSMUST00000121961 546 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm5976-201ENSMUST00000180794 996 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm18304-201ENSMUST00000189162 546 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC11.76□□□□□ -0.53
Col9a1Q05722 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC11.76□□□□□ -0.53
Col9a1Q05722 Gm18492-201ENSMUST00000198141 1018 ntBASIC11.76□□□□□ -0.53
Col9a1Q05722 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms