Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm23912-201ENSMUST00000104687 87 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm12337-201ENSMUST00000119634 400 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm17192-201ENSMUST00000169031 511 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm25677-201ENSMUST00000174983 72 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm43380-201ENSMUST00000200421 220 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm45592-201ENSMUST00000209605 1043 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm4811-201ENSMUST00000220879 1220 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 AC154305.4-201ENSMUST00000224520 614 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.92□□□□□ -0.82
Col8a1Q00780 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col8a1Q00780 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col8a1Q00780 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Col8a1Q00780 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.91□□□□□ -0.82
Col8a1Q00780 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col8a1Q00780 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col8a1Q00780 Gm18798-201ENSMUST00000187264 1700 ntBASIC9.91□□□□□ -0.82
Col8a1Q00780 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col8a1Q00780 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col8a1Q00780 Zfp961-203ENSMUST00000132848 781 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a1Q00780 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC9.91□□□□□ -0.82
Col8a1Q00780 Gm23675-201ENSMUST00000157311 125 ntBASIC9.91□□□□□ -0.82
Col8a1Q00780 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC9.91□□□□□ -0.82
Col8a1Q00780 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms