Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm22920-201ENSMUST00000102175 109 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm8731-201ENSMUST00000118088 412 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm22144-201ENSMUST00000157402 102 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm44270-201ENSMUST00000203084 1234 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.98□□□□□ -0.65
Nkx3-2P97503 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Nkx3-2P97503 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm15566-201ENSMUST00000121130 590 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm9192-201ENSMUST00000183221 985 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm42599-201ENSMUST00000201308 469 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm44551-201ENSMUST00000208804 171 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm6903-201ENSMUST00000160509 1366 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.97□□□□□ -0.65
Nkx3-2P97503 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Nkx3-2P97503 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Nkx3-2P97503 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms