Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Tubb1-201ENSMUST00000016399 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cacna1aP97445 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC10.71□□□□□ -0.69
Cacna1aP97445 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC10.71□□□□□ -0.69
Cacna1aP97445 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.71□□□□□ -0.69
Cacna1aP97445 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.71□□□□□ -0.69
Cacna1aP97445 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.71□□□□□ -0.69
Cacna1aP97445 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.71□□□□□ -0.69
Cacna1aP97445 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.71□□□□□ -0.69
Cacna1aP97445 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.71□□□□□ -0.69
Cacna1aP97445 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Cacna1aP97445 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.71□□□□□ -0.69
Cacna1aP97445 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Cacna1aP97445 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.71□□□□□ -0.7
Cacna1aP97445 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Gm45199-201ENSMUST00000207640 1507 ntBASIC10.71□□□□□ -0.7
Cacna1aP97445 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.71□□□□□ -0.7
Cacna1aP97445 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC10.71□□□□□ -0.7
Cacna1aP97445 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.71□□□□□ -0.7
Cacna1aP97445 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC10.71□□□□□ -0.7
Cacna1aP97445 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.71□□□□□ -0.7
Cacna1aP97445 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Cacna1aP97445 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm9673-201ENSMUST00000119287 781 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm25226-201ENSMUST00000158198 123 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm25677-201ENSMUST00000174983 72 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm5650-201ENSMUST00000209641 598 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 AC138716.2-201ENSMUST00000226670 1016 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm37851-201ENSMUST00000193871 889 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Cacna1aP97445 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.7□□□□□ -0.7
Cacna1aP97445 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cacna1aP97445 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cacna1aP97445 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms