Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.57□□□□□ -0.4
Trim43cP86449 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim43cP86449 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim43cP86449 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
Trim43cP86449 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.57□□□□□ -0.4
Trim43cP86449 Gm15566-201ENSMUST00000121130 590 ntBASIC12.57□□□□□ -0.4
Trim43cP86449 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim43cP86449 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Mir7070-201ENSMUST00000183657 86 ntBASIC12.57□□□□□ -0.4
Trim43cP86449 Gm19353-201ENSMUST00000184561 445 ntBASIC12.57□□□□□ -0.4
Trim43cP86449 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.57□□□□□ -0.4
Trim43cP86449 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trim43cP86449 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trim43cP86449 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trim43cP86449 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.57□□□□□ -0.4
Trim43cP86449 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trim43cP86449 Gm45532-201ENSMUST00000210342 3620 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim43cP86449 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Gm12407-201ENSMUST00000180219 324 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Olfr584-201ENSMUST00000098210 964 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm17230-201ENSMUST00000171194 3942 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.56□□□□□ -0.4
Trim43cP86449 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim43cP86449 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim43cP86449 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim43cP86449 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim43cP86449 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim43cP86449 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim43cP86449 Gm12419-201ENSMUST00000116649 636 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim43cP86449 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.55□□□□□ -0.4
Trim43cP86449 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim43cP86449 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms