Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm6397-201ENSMUST00000161973 1069 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm20426-201ENSMUST00000173657 440 ntBASIC10.38□□□□□ -0.75
SgcbP82349 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm10774-201ENSMUST00000188689 204 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm38247-201ENSMUST00000194675 433 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm5708-201ENSMUST00000196289 886 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm42997-202ENSMUST00000200321 985 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC10.38□□□□□ -0.75
SgcbP82349 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC10.38□□□□□ -0.75
SgcbP82349 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
SgcbP82349 Ginm1-202ENSMUST00000065124 300 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Gm7551-201ENSMUST00000089593 1074 ntBASIC10.38□□□□□ -0.75
SgcbP82349 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.38□□□□□ -0.75
SgcbP82349 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
SgcbP82349 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
SgcbP82349 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.37□□□□□ -0.75
SgcbP82349 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.37□□□□□ -0.75
SgcbP82349 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.37□□□□□ -0.75
SgcbP82349 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcbP82349 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcbP82349 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Gm19353-201ENSMUST00000184561 445 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Gm29013-201ENSMUST00000187431 237 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Gm35960-201ENSMUST00000202712 767 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Gm6108-201ENSMUST00000208365 367 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
SgcbP82349 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.37□□□□□ -0.75
SgcbP82349 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Scn9a-201ENSMUST00000100063 9813 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Scn9a-202ENSMUST00000100064 9840 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
SgcbP82349 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
SgcbP82349 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms