Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CiitaP79621 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CiitaP79621 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
CiitaP79621 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Gm25148-201ENSMUST00000104611 123 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Mir1901-201ENSMUST00000122616 78 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CiitaP79621 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.53□□□□□ -0.4
CiitaP79621 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Gm42657-201ENSMUST00000201746 211 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Gm2875-201ENSMUST00000211333 360 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.53□□□□□ -0.4
CiitaP79621 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CiitaP79621 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CiitaP79621 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
CiitaP79621 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
CiitaP79621 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.52□□□□□ -0.4
CiitaP79621 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
CiitaP79621 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CiitaP79621 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.52□□□□□ -0.41
CiitaP79621 Gm15528-201ENSMUST00000117821 864 ntBASIC12.52□□□□□ -0.41
CiitaP79621 Gm16219-201ENSMUST00000120096 274 ntBASIC12.52□□□□□ -0.41
CiitaP79621 Gm12516-201ENSMUST00000120819 385 ntBASIC12.52□□□□□ -0.41
CiitaP79621 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.52□□□□□ -0.41
CiitaP79621 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Gm5342-201ENSMUST00000181982 1003 ntBASIC12.52□□□□□ -0.41
CiitaP79621 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
CiitaP79621 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC12.52□□□□□ -0.41
CiitaP79621 Gm9661-201ENSMUST00000221611 1122 ntBASIC12.52□□□□□ -0.41
CiitaP79621 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CiitaP79621 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.52□□□□□ -0.41
CiitaP79621 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
CiitaP79621 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
CiitaP79621 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 AC167022.1-201ENSMUST00000218647 1458 ntBASIC12.52□□□□□ -0.41
CiitaP79621 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CiitaP79621 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CiitaP79621 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.51□□□□□ -0.41
CiitaP79621 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.51□□□□□ -0.41
CiitaP79621 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CiitaP79621 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CiitaP79621 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CiitaP79621 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms