Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shox2P70390 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.38□□□□□ -0.59
Shox2P70390 Gm11591-201ENSMUST00000120063 702 ntBASIC11.38□□□□□ -0.59
Shox2P70390 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11.38□□□□□ -0.59
Shox2P70390 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Gm42627-201ENSMUST00000197347 224 ntBASIC11.38□□□□□ -0.59
Shox2P70390 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Shox2P70390 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Shox2P70390 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.38□□□□□ -0.59
Shox2P70390 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.38□□□□□ -0.59
Shox2P70390 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Hmbox1-205ENSMUST00000176128 2958 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shox2P70390 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC11.37□□□□□ -0.59
Shox2P70390 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
Shox2P70390 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Shox2P70390 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.37□□□□□ -0.59
Shox2P70390 Gm14832-201ENSMUST00000121289 322 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.37□□□□□ -0.59
Shox2P70390 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Shox2P70390 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shox2P70390 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.37□□□□□ -0.59
Shox2P70390 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Shox2P70390 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.37□□□□□ -0.59
Shox2P70390 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Shox2P70390 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Shox2P70390 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shox2P70390 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Shox2P70390 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Shox2P70390 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms