Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Mospd4-201ENSMUST00000180618 576 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm29396-201ENSMUST00000185659 716 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm43118-201ENSMUST00000199149 775 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm18935-201ENSMUST00000212692 664 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm26232-201ENSMUST00000083360 166 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.45□□□□□ -0.58
Crnkl1P63154 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.45□□□□□ -0.58
Crnkl1P63154 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Crnkl1P63154 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Crnkl1P63154 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.44□□□□□ -0.58
Crnkl1P63154 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.44□□□□□ -0.58
Crnkl1P63154 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Wbp1l-202ENSMUST00000111855 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gm38266-201ENSMUST00000194931 421 ntBASIC11.44□□□□□ -0.58
Crnkl1P63154 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC11.44□□□□□ -0.58
Crnkl1P63154 Gm45331-201ENSMUST00000209868 554 ntBASIC11.44□□□□□ -0.58
Crnkl1P63154 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Crnkl1P63154 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Crnkl1P63154 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.43□□□□□ -0.58
Crnkl1P63154 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC11.43□□□□□ -0.58
Crnkl1P63154 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Crnkl1P63154 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Crnkl1P63154 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Crnkl1P63154 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms