Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Lsm6P62313 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.17□□□□□ -0.78
Lsm6P62313 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm45113-201ENSMUST00000207518 165 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Gm6108-201ENSMUST00000208365 367 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Gm45575-201ENSMUST00000210283 548 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Gm10254-201ENSMUST00000052888 867 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Lsm6P62313 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Lsm6P62313 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.17□□□□□ -0.78
Lsm6P62313 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC10.17□□□□□ -0.78
Lsm6P62313 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Lsm6P62313 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Lsm6P62313 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.16□□□□□ -0.78
Lsm6P62313 AC165351.1-201ENSMUST00000219078 2020 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm14071-201ENSMUST00000117817 509 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm6039-201ENSMUST00000121667 1250 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm17040-202ENSMUST00000170597 889 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm4857-201ENSMUST00000192718 785 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.16□□□□□ -0.78
Lsm6P62313 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm6867-201ENSMUST00000219165 425 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.16□□□□□ -0.78
Lsm6P62313 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm10288-201ENSMUST00000084614 537 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm21811-201ENSMUST00000096485 930 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Lsm6P62313 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Btrc-209ENSMUST00000224478 2194 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.16□□□□□ -0.78
Lsm6P62313 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Lsm6P62313 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Lsm6P62313 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Lsm6P62313 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.16□□□□□ -0.78
Lsm6P62313 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Lsm6P62313 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms