Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Slc7a3-203ENSMUST00000113710 2750 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gfm2-201ENSMUST00000022170 3089 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Ptk2b-203ENSMUST00000111121 3365 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm23935-201ENSMUST00000102303 57 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Gm24270-201ENSMUST00000102326 57 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm13736-201ENSMUST00000119272 253 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Gm13342-201ENSMUST00000121055 207 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.46□□□□□ -0.73
Lsm3P62311 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm24245-201ENSMUST00000157318 57 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm6736-201ENSMUST00000166583 948 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.46□□□□□ -0.73
Lsm3P62311 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Gm45930-201ENSMUST00000221330 292 ntBASIC10.46□□□□□ -0.73
Lsm3P62311 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Lsm3P62311 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Lsm3P62311 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Lsm3P62311 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.46□□□□□ -0.74
Lsm3P62311 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.46□□□□□ -0.74
Lsm3P62311 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Lsm3P62311 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Lsm3P62311 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Lsm3P62311 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Lsm3P62311 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
Lsm3P62311 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm3P62311 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm3P62311 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm3P62311 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC10.45□□□□□ -0.74
Lsm3P62311 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Slc25a44-204ENSMUST00000195657 3504 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Ddr1-203ENSMUST00000117301 3874 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Lsm3P62311 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Lsm3P62311 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Lsm3P62311 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm6124-201ENSMUST00000188240 2580 ntBASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13694-201ENSMUST00000178533 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13693-201ENSMUST00000178960 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13698-202ENSMUST00000179192 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13696-202ENSMUST00000180347 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13691-201ENSMUST00000099947 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13697-201ENSMUST00000099948 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm13695-201ENSMUST00000099951 2493 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Lsm3P62311 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Gm5912-201ENSMUST00000122282 1438 ntBASIC10.44□□□□□ -0.74
Lsm3P62311 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Lsm3P62311 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms