Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.29□□□□□ -0.76
Sf3b6P59708 Gm10829-201ENSMUST00000202084 2988 ntBASIC10.29□□□□□ -0.76
Sf3b6P59708 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sf3b6P59708 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm27516-201ENSMUST00000184237 98 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm38158-201ENSMUST00000194617 339 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm43822-201ENSMUST00000200285 476 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm43966-201ENSMUST00000203301 612 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm18065-201ENSMUST00000221395 526 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sf3b6P59708 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 AC126444.1-201ENSMUST00000225938 1768 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sf3b6P59708 Gm8752-201ENSMUST00000173427 1694 ntBASIC10.28□□□□□ -0.76
Sf3b6P59708 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b6P59708 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC10.27□□□□□ -0.76
Sf3b6P59708 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b6P59708 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Sf3b6P59708 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.27□□□□□ -0.76
Sf3b6P59708 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b6P59708 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.27□□□□□ -0.76
Sf3b6P59708 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b6P59708 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b6P59708 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sf3b6P59708 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.27□□□□□ -0.77
Sf3b6P59708 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.27□□□□□ -0.77
Sf3b6P59708 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm26956-201ENSMUST00000182176 986 ntBASIC10.27□□□□□ -0.77
Sf3b6P59708 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.27□□□□□ -0.77
Sf3b6P59708 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.27□□□□□ -0.77
Sf3b6P59708 Gm7441-201ENSMUST00000220697 1074 ntBASIC10.27□□□□□ -0.77
Sf3b6P59708 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms