Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.32□□□□□ -0.92
Sssca1P56873 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC9.32□□□□□ -0.92
Sssca1P56873 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Sssca1P56873 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.32□□□□□ -0.92
Sssca1P56873 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Sssca1P56873 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm12015-201ENSMUST00000117065 843 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm11424-201ENSMUST00000121929 829 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Gm15547-201ENSMUST00000122152 333 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC9.31□□□□□ -0.92
Sssca1P56873 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.31□□□□□ -0.92
Sssca1P56873 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC9.31□□□□□ -0.92
Sssca1P56873 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC9.31□□□□□ -0.92
Sssca1P56873 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm38002-201ENSMUST00000193255 180 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Gm7046-201ENSMUST00000221351 977 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Gm18065-201ENSMUST00000221395 526 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Sssca1P56873 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Sssca1P56873 AC125374.1-201ENSMUST00000213573 1400 ntBASIC9.31□□□□□ -0.92
Sssca1P56873 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Sssca1P56873 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Sssca1P56873 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.3□□□□□ -0.92
Sssca1P56873 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Sssca1P56873 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms