Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.36□□□□□ -0.75
Abcd3P55096 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Abcd3P55096 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Abcd3P55096 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm45532-201ENSMUST00000210342 3620 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Abcd3P55096 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm25881-201ENSMUST00000157783 103 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.35□□□□□ -0.75
Abcd3P55096 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Mir5132-201ENSMUST00000175166 71 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Abcd3P55096 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC10.35□□□□□ -0.75
Abcd3P55096 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC10.35□□□□□ -0.75
Abcd3P55096 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm6867-201ENSMUST00000219165 425 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Gm4978-201ENSMUST00000071565 801 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Abcd3P55096 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Abcd3P55096 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Abcd3P55096 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC10.35□□□□□ -0.75
Abcd3P55096 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Abcd3P55096 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.35□□□□□ -0.75
Abcd3P55096 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.34□□□□□ -0.75
Abcd3P55096 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Gm13910-201ENSMUST00000121752 1428 ntBASIC10.34□□□□□ -0.75
Abcd3P55096 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Abcd3P55096 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Abcd3P55096 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Abcd3P55096 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Gm14017-201ENSMUST00000121934 386 ntBASIC10.34□□□□□ -0.75
Abcd3P55096 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.34□□□□□ -0.75
Abcd3P55096 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC10.34□□□□□ -0.75
Abcd3P55096 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Abcd3P55096 Gm18734-201ENSMUST00000172937 808 ntBASIC10.34□□□□□ -0.75
Abcd3P55096 Gm2383-201ENSMUST00000181461 807 ntBASIC10.34□□□□□ -0.75
Abcd3P55096 Gm8100-201ENSMUST00000182906 988 ntBASIC10.34□□□□□ -0.75
Abcd3P55096 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.34□□□□□ -0.75
Abcd3P55096 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Abcd3P55096 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms