Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC13.18□□□□□ -0.3
Psmc4P54775 Gm26047-202ENSMUST00000198840 115 ntBASIC13.18□□□□□ -0.3
Psmc4P54775 Trav11n-201ENSMUST00000200113 343 ntBASIC13.18□□□□□ -0.3
Psmc4P54775 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Psmc4P54775 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Psmc4P54775 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Gm29100-201ENSMUST00000187564 4410 ntBASIC13.18□□□□□ -0.3
Psmc4P54775 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.18□□□□□ -0.3
Psmc4P54775 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.18□□□□□ -0.3
Psmc4P54775 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Psmc4P54775 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Psmc4P54775 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Gm10807-201ENSMUST00000177134 795 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 Gm18776-201ENSMUST00000188833 654 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm43163-201ENSMUST00000196571 442 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm7504-201ENSMUST00000201449 424 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm5340-201ENSMUST00000203733 880 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm39288-201ENSMUST00000210554 446 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Gm40879-201ENSMUST00000220759 612 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Psmc4P54775 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.17□□□□□ -0.3
Psmc4P54775 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Psmc4P54775 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Psmc4P54775 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Psmc4P54775 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Psmc4P54775 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.16□□□□□ -0.3
Psmc4P54775 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Gm17192-201ENSMUST00000169031 511 ntBASIC13.16□□□□□ -0.3
Psmc4P54775 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.16□□□□□ -0.3
Psmc4P54775 Gm20414-201ENSMUST00000172918 646 ntBASIC13.16□□□□□ -0.3
Psmc4P54775 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC13.16□□□□□ -0.3
Psmc4P54775 Gm43671-201ENSMUST00000200422 433 ntBASIC13.16□□□□□ -0.3
Psmc4P54775 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Psmc4P54775 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Psmc4P54775 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Psmc4P54775 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.16□□□□□ -0.3
Psmc4P54775 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.16□□□□□ -0.3
Psmc4P54775 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Psmc4P54775 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Psmc4P54775 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms