Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.85□□□□□ -0.51
Sox1P53783 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.85□□□□□ -0.51
Sox1P53783 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Sox1P53783 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.85□□□□□ -0.51
Sox1P53783 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sox1P53783 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 Bcl2l11-204ENSMUST00000103211 672 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Sox1P53783 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox1P53783 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC11.84□□□□□ -0.51
Sox1P53783 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Gm23647-201ENSMUST00000175042 109 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm4705-201ENSMUST00000177415 354 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Rn5s-201ENSMUST00000177555 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm22109-201ENSMUST00000177995 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm22291-201ENSMUST00000178027 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm23284-201ENSMUST00000178069 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm25018-201ENSMUST00000179081 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm25212-201ENSMUST00000179432 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm26391-201ENSMUST00000179843 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.84□□□□□ -0.51
Sox1P53783 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC11.84□□□□□ -0.51
Sox1P53783 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Gm17931-201ENSMUST00000208132 634 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox1P53783 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sox1P53783 Gm24089-201ENSMUST00000093696 109 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Gm44414-201ENSMUST00000203660 2109 ntBASIC11.84□□□□□ -0.51
Sox1P53783 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sox1P53783 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sox1P53783 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 128.6 ms