Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm37008-201ENSMUST00000195712 319 ntBASIC9.57□□□□□ -0.88
Nkx2-1P50220 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm37954-201ENSMUST00000195400 2071 ntBASIC9.57□□□□□ -0.88
Nkx2-1P50220 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC9.57□□□□□ -0.88
Nkx2-1P50220 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC9.57□□□□□ -0.88
Nkx2-1P50220 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Gm18626-201ENSMUST00000221512 1409 ntBASIC9.56□□□□□ -0.88
Nkx2-1P50220 Gm7841-201ENSMUST00000122108 1629 ntBASIC9.56□□□□□ -0.88
Nkx2-1P50220 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 AC129931.1-201ENSMUST00000228865 1861 ntBASIC9.56□□□□□ -0.88
Nkx2-1P50220 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.56□□□□□ -0.88
Nkx2-1P50220 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC9.56□□□□□ -0.88
Nkx2-1P50220 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Nkx2-1P50220 Gm5703-201ENSMUST00000186658 3973 ntBASIC9.56□□□□□ -0.88
Nkx2-1P50220 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Sod3-201ENSMUST00000101208 3738 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Nkx2-1P50220 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms