Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.14□□□□□ -0.63
Tnfsf4P43488 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.14□□□□□ -0.63
Tnfsf4P43488 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.14□□□□□ -0.63
Tnfsf4P43488 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm3329-201ENSMUST00000159873 556 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm6439-201ENSMUST00000199849 862 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm45224-201ENSMUST00000208203 414 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm9797-202ENSMUST00000218003 294 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Tnfsf4P43488 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 AC153506.1-201ENSMUST00000218768 2915 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Gm14071-201ENSMUST00000117817 509 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
Tnfsf4P43488 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Mir8109-201ENSMUST00000184375 117 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 AA914427-201ENSMUST00000193194 1166 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Gm17827-201ENSMUST00000211825 742 ntBASIC11.12□□□□□ -0.63
Tnfsf4P43488 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Tnfsf4P43488 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms