Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.93□□□□□ -0.5
Msh2P43247 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msh2P43247 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.92□□□□□ -0.5
Msh2P43247 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msh2P43247 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.92□□□□□ -0.5
Msh2P43247 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.92□□□□□ -0.5
Msh2P43247 Gm13996-201ENSMUST00000118456 430 ntBASIC11.92□□□□□ -0.5
Msh2P43247 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.92□□□□□ -0.5
Msh2P43247 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msh2P43247 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.92□□□□□ -0.5
Msh2P43247 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.92□□□□□ -0.5
Msh2P43247 Gm8913-201ENSMUST00000209491 641 ntBASIC11.92□□□□□ -0.5
Msh2P43247 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Msh2P43247 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.92□□□□□ -0.5
Msh2P43247 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.92□□□□□ -0.5
Msh2P43247 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msh2P43247 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msh2P43247 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.91□□□□□ -0.5
Msh2P43247 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Msh2P43247 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Msh2P43247 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.91□□□□□ -0.5
Msh2P43247 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.91□□□□□ -0.5
Msh2P43247 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.91□□□□□ -0.5
Msh2P43247 Gm6439-201ENSMUST00000199849 862 ntBASIC11.91□□□□□ -0.5
Msh2P43247 Gm17812-201ENSMUST00000204935 318 ntBASIC11.91□□□□□ -0.5
Msh2P43247 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Msh2P43247 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.91□□□□□ -0.5
Msh2P43247 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
Msh2P43247 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Msh2P43247 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Msh2P43247 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.91□□□□□ -0.5
Msh2P43247 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Msh2P43247 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msh2P43247 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 149.3 ms