Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm8762-201ENSMUST00000193486 339 ntBASIC9.72□□□□□ -0.85
Hmx3P42581 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.72□□□□□ -0.85
Hmx3P42581 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC9.72□□□□□ -0.85
Hmx3P42581 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC9.72□□□□□ -0.85
Hmx3P42581 AC140451.2-201ENSMUST00000228030 664 ntBASIC9.72□□□□□ -0.85
Hmx3P42581 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Snora73a-201ENSMUST00000082453 205 ntBASIC9.72□□□□□ -0.85
Hmx3P42581 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.72□□□□□ -0.85
Hmx3P42581 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Hmx3P42581 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Hmx3P42581 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Hmx3P42581 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC9.71□□□□□ -0.85
Hmx3P42581 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Hmx3P42581 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.71□□□□□ -0.85
Hmx3P42581 Acss3-203ENSMUST00000165067 4696 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Hmx3P42581 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC9.71□□□□□ -0.85
Hmx3P42581 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.71□□□□□ -0.85
Hmx3P42581 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Epc1-201ENSMUST00000028100 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Gm15953-201ENSMUST00000117656 1732 ntBASIC9.71□□□□□ -0.85
Hmx3P42581 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.71□□□□□ -0.85
Hmx3P42581 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.85
Hmx3P42581 Gm38169-201ENSMUST00000191822 2539 ntBASIC9.71□□□□□ -0.85
Hmx3P42581 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Mir1982-201ENSMUST00000157368 74 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC9.71□□□□□ -0.86
Hmx3P42581 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC9.71□□□□□ -0.86
Hmx3P42581 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.71□□□□□ -0.86
Hmx3P42581 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Gm5781-201ENSMUST00000219792 443 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Hmx3P42581 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Hmx3P42581 Gm8038-201ENSMUST00000164674 2044 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Gm42608-201ENSMUST00000197563 2018 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Zbtb25-202ENSMUST00000176102 2707 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Hmx3P42581 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Hmx3P42581 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Rpl18-207ENSMUST00000210640 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Hmx3P42581 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Gm26780-201ENSMUST00000180748 2495 ntTSL 5 BASIC9.71□□□□□ -0.86
Hmx3P42581 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC9.71□□□□□ -0.86
Hmx3P42581 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Hmx3P42581 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hmx3P42581 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.7□□□□□ -0.86
Hmx3P42581 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hmx3P42581 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC9.7□□□□□ -0.86
Hmx3P42581 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hmx3P42581 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Hmx3P42581 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Hmx3P42581 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms