Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Sox6P40645 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Sox6P40645 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox6P40645 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.89□□□□□ -0.67
Sox6P40645 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC10.88□□□□□ -0.67
Sox6P40645 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.88□□□□□ -0.67
Sox6P40645 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox6P40645 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Sox6P40645 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Gm13296-201ENSMUST00000117854 997 ntBASIC10.88□□□□□ -0.67
Sox6P40645 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.88□□□□□ -0.67
Sox6P40645 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.88□□□□□ -0.67
Sox6P40645 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.88□□□□□ -0.67
Sox6P40645 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox6P40645 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox6P40645 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Gm37969-201ENSMUST00000195777 3409 ntBASIC10.87□□□□□ -0.67
Sox6P40645 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.87□□□□□ -0.67
Sox6P40645 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.87□□□□□ -0.67
Sox6P40645 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.87□□□□□ -0.67
Sox6P40645 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox6P40645 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.87□□□□□ -0.67
Sox6P40645 Gm12036-201ENSMUST00000120008 530 ntBASIC10.87□□□□□ -0.67
Sox6P40645 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox6P40645 Gm26361-201ENSMUST00000158868 186 ntBASIC10.87□□□□□ -0.67
Sox6P40645 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox6P40645 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox6P40645 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox6P40645 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox6P40645 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox6P40645 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox6P40645 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox6P40645 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox6P40645 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms