Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Gm13898-201ENSMUST00000141865 610 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Gm7255-201ENSMUST00000187371 908 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC16.95■□□□□ 0.3
Chd1P40201 Smim23-201ENSMUST00000020508 620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.95■□□□□ 0.3
Chd1P40201 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chd1P40201 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Gm15599-201ENSMUST00000122283 1345 ntBASIC16.94■□□□□ 0.3
Chd1P40201 Gm24066-201ENSMUST00000104515 131 ntBASIC16.94■□□□□ 0.3
Chd1P40201 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC16.94■□□□□ 0.3
Chd1P40201 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Gm8615-201ENSMUST00000025307 771 ntBASIC16.94■□□□□ 0.3
Chd1P40201 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chd1P40201 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chd1P40201 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chd1P40201 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Gm15702-201ENSMUST00000119680 444 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC16.93■□□□□ 0.3
Chd1P40201 Gm13201-201ENSMUST00000144031 600 ntTSL 3 BASIC16.93■□□□□ 0.3
Chd1P40201 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chd1P40201 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd1P40201 Gm6713-201ENSMUST00000216137 1446 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC16.93■□□□□ 0.3
Chd1P40201 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chd1P40201 Gm4925-202ENSMUST00000168843 1561 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Gm15720-201ENSMUST00000117133 282 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC16.93■□□□□ 0.3
Chd1P40201 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Gm17799-201ENSMUST00000183270 667 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Gm5845-201ENSMUST00000195812 796 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC16.93■□□□□ 0.3
Chd1P40201 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chd1P40201 Atf7-201ENSMUST00000096143 390 ntBASIC16.93■□□□□ 0.3
Chd1P40201 Esp6-201ENSMUST00000097324 658 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chd1P40201 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC16.92■□□□□ 0.3
Chd1P40201 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chd1P40201 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chd1P40201 Gm13002-201ENSMUST00000119286 682 ntBASIC16.92■□□□□ 0.3
Chd1P40201 Gm23916-201ENSMUST00000158484 399 ntBASIC16.92■□□□□ 0.3
Chd1P40201 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chd1P40201 Gm22616-201ENSMUST00000179783 100 ntBASIC16.92■□□□□ 0.3
Chd1P40201 Gm28179-201ENSMUST00000188365 613 ntBASIC16.92■□□□□ 0.3
Chd1P40201 Gm28079-206ENSMUST00000188554 1170 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Chd1P40201 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC16.92■□□□□ 0.3
Chd1P40201 Sparc-208ENSMUST00000214685 1269 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Chd1P40201 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chd1P40201 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Chd1P40201 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
Chd1P40201 Gm7224-201ENSMUST00000121359 2066 ntBASIC16.92■□□□□ 0.3
Chd1P40201 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chd1P40201 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms