Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.93□□□□□ -0.02
Col18a1P39061 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Gm9790-201ENSMUST00000054148 288 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 AC116596.1-201ENSMUST00000228112 1762 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Gm43972-201ENSMUST00000181398 1467 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Stmn3-201ENSMUST00000103045 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm18443-201ENSMUST00000185358 556 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Gm18621-201ENSMUST00000222677 679 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 CT025679.1-201ENSMUST00000227106 449 ntBASIC14.93□□□□□ -0.02
Col18a1P39061 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC14.93□□□□□ -0.02
Col18a1P39061 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.93□□□□□ -0.02
Col18a1P39061 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Col18a1P39061 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Col18a1P39061 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col18a1P39061 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Gm9544-201ENSMUST00000223349 2482 ntBASIC14.92□□□□□ -0.02
Col18a1P39061 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC14.92□□□□□ -0.02
Col18a1P39061 Gm14571-201ENSMUST00000118292 570 ntBASIC14.92□□□□□ -0.02
Col18a1P39061 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Col18a1P39061 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 1700026D11Rik-205ENSMUST00000151417 789 ntTSL 3 BASIC14.92□□□□□ -0.02
Col18a1P39061 Mir3060-201ENSMUST00000175339 83 ntBASIC14.92□□□□□ -0.02
Col18a1P39061 Gm4866-201ENSMUST00000197408 589 ntBASIC14.92□□□□□ -0.02
Col18a1P39061 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC14.92□□□□□ -0.02
Col18a1P39061 Gm40153-201ENSMUST00000197904 637 ntTSL 3 BASIC14.92□□□□□ -0.02
Col18a1P39061 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Atf7-201ENSMUST00000096143 390 ntBASIC14.92□□□□□ -0.02
Col18a1P39061 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 9530059O14Rik-204ENSMUST00000215759 1606 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Col18a1P39061 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.92□□□□□ -0.02
Col18a1P39061 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Col18a1P39061 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Col18a1P39061 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Mir291b-201ENSMUST00000104838 79 ntBASIC14.91□□□□□ -0.02
Col18a1P39061 Gm12136-201ENSMUST00000120460 1209 ntBASIC14.91□□□□□ -0.02
Col18a1P39061 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC14.91□□□□□ -0.02
Col18a1P39061 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col18a1P39061 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col18a1P39061 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Gm9515-201ENSMUST00000200276 647 ntBASIC14.91□□□□□ -0.02
Col18a1P39061 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.91□□□□□ -0.02
Col18a1P39061 Gm38246-201ENSMUST00000194318 1511 ntBASIC14.91□□□□□ -0.02
Col18a1P39061 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Col18a1P39061 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Col18a1P39061 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.91□□□□□ -0.02
Col18a1P39061 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC14.91□□□□□ -0.02
Col18a1P39061 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Col18a1P39061 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Col18a1P39061 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms