Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm11996-201ENSMUST00000117538 915 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm11957-201ENSMUST00000118304 779 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm11502-201ENSMUST00000120917 1211 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm14441-201ENSMUST00000121960 540 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.69□□□□□ -0.7
Sftpa1P35242 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm17709-201ENSMUST00000174536 1096 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm9162-201ENSMUST00000182081 991 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
Sftpa1P35242 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 AC158388.3-202ENSMUST00000225517 775 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 AC154305.2-201ENSMUST00000225813 901 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.69□□□□□ -0.7
Sftpa1P35242 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Sftpa1P35242 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.69□□□□□ -0.7
Sftpa1P35242 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Gm26670-202ENSMUST00000226862 340 ntBASIC10.68□□□□□ -0.7
Sftpa1P35242 Gm8181-201ENSMUST00000062242 669 ntBASIC10.68□□□□□ -0.7
Sftpa1P35242 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Sftpa1P35242 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Sftpa1P35242 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.67□□□□□ -0.7
Sftpa1P35242 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Sftpa1P35242 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Sftpa1P35242 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms