Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Gm5847-201ENSMUST00000178959 1595 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11□□□□□ -0.65
Slc6a11P31650 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm13408-201ENSMUST00000119822 798 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm13935-201ENSMUST00000121859 798 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Slc6a11P31650 Gm18734-201ENSMUST00000172937 808 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC11□□□□□ -0.65
Slc6a11P31650 Gm27552-201ENSMUST00000183351 62 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm27844-201ENSMUST00000183613 62 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm17812-201ENSMUST00000204935 318 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Gm45219-201ENSMUST00000205602 465 ntBASIC11□□□□□ -0.65
Slc6a11P31650 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11□□□□□ -0.65
Slc6a11P31650 D9Wsu149-201ENSMUST00000214169 594 ntBASIC11□□□□□ -0.65
Slc6a11P31650 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11□□□□□ -0.65
Slc6a11P31650 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11□□□□□ -0.65
Slc6a11P31650 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm32999-201ENSMUST00000192693 562 ntBASIC10.99□□□□□ -0.65
Slc6a11P31650 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 AC125486.1-201ENSMUST00000218701 320 ntBASIC10.99□□□□□ -0.65
Slc6a11P31650 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.99□□□□□ -0.65
Slc6a11P31650 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Slc6a11P31650 Gm43081-201ENSMUST00000199082 1380 ntBASIC10.99□□□□□ -0.65
Slc6a11P31650 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms