Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm6714-201ENSMUST00000218677 2330 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Nedd8P29595 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm13736-201ENSMUST00000119272 253 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 Gm11803-201ENSMUST00000119966 444 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Nedd8P29595 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm43692-201ENSMUST00000198236 1062 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Tank-203ENSMUST00000112495 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Gm11131-201ENSMUST00000113886 3122 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.61□□□□□ -0.71
Nedd8P29595 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Nln-205ENSMUST00000224945 2486 ntBASIC10.61□□□□□ -0.71
Nedd8P29595 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Nedd8P29595 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Dgkh-201ENSMUST00000074729 3967 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Wdr60-201ENSMUST00000039349 3721 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.6□□□□□ -0.71
Nedd8P29595 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm2673-201ENSMUST00000120958 1608 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm12502-201ENSMUST00000120197 444 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC10.6□□□□□ -0.71
Nedd8P29595 Mir6392-201ENSMUST00000184924 108 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 Gm2213-201ENSMUST00000197485 688 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
Nedd8P29595 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Map4-204ENSMUST00000164930 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.6□□□□□ -0.71
Nedd8P29595 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Nedd8P29595 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.6□□□□□ -0.71
Nedd8P29595 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nedd8P29595 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nedd8P29595 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nedd8P29595 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Nedd8P29595 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Nedd8P29595 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nedd8P29595 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Nedd8P29595 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms