Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.25□□□□□ -0.29
Vcam1P29533 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm26982-201ENSMUST00000182250 1151 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm43671-201ENSMUST00000200422 433 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Gm43912-201ENSMUST00000204352 538 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Gm35713-201ENSMUST00000210516 199 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 Gm7525-201ENSMUST00000219425 454 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Mir483-201ENSMUST00000093631 73 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC13.25□□□□□ -0.29
Vcam1P29533 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vcam1P29533 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vcam1P29533 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm9244-201ENSMUST00000056767 2129 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vcam1P29533 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Vcam1P29533 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm11560-201ENSMUST00000117567 948 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Gm11980-201ENSMUST00000121445 986 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm16030-201ENSMUST00000159098 603 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.24□□□□□ -0.29
Vcam1P29533 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.24□□□□□ -0.29
Vcam1P29533 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC13.24□□□□□ -0.29
Vcam1P29533 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC13.24□□□□□ -0.29
Vcam1P29533 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Vcam1P29533 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vcam1P29533 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Vcam1P29533 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vcam1P29533 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.24□□□□□ -0.29
Vcam1P29533 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Vcam1P29533 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm14497-201ENSMUST00000119537 580 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm19246-201ENSMUST00000173599 255 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm43002-201ENSMUST00000200310 155 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.23□□□□□ -0.29
Vcam1P29533 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Id2-203ENSMUST00000222667 958 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Vcam1P29533 AC122035.1-201ENSMUST00000227576 1016 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 AC154589.2-201ENSMUST00000228847 251 ntBASIC13.23□□□□□ -0.29
Vcam1P29533 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms