Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm5944-201ENSMUST00000118182 1001 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm12463-201ENSMUST00000118271 849 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm11502-201ENSMUST00000120917 1211 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.97□□□□□ -0.33
Col2a1P28481 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Gm17070-201ENSMUST00000170463 784 ntBASIC12.97□□□□□ -0.33
Col2a1P28481 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC12.97□□□□□ -0.33
Col2a1P28481 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC12.97□□□□□ -0.33
Col2a1P28481 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC12.97□□□□□ -0.33
Col2a1P28481 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col2a1P28481 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col2a1P28481 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col2a1P28481 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Col2a1P28481 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col2a1P28481 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col2a1P28481 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Col2a1P28481 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.96□□□□□ -0.33
Col2a1P28481 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.96□□□□□ -0.33
Col2a1P28481 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.96□□□□□ -0.33
Col2a1P28481 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col2a1P28481 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Gm24791-201ENSMUST00000104284 131 ntBASIC12.96□□□□□ -0.34
Col2a1P28481 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Col2a1P28481 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.96□□□□□ -0.34
Col2a1P28481 Gm13019-201ENSMUST00000120000 276 ntBASIC12.96□□□□□ -0.34
Col2a1P28481 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC12.96□□□□□ -0.34
Col2a1P28481 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Gm5529-201ENSMUST00000165691 891 ntBASIC12.96□□□□□ -0.34
Col2a1P28481 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC12.96□□□□□ -0.34
Col2a1P28481 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC12.96□□□□□ -0.34
Col2a1P28481 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.96□□□□□ -0.34
Col2a1P28481 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.96□□□□□ -0.34
Col2a1P28481 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.96□□□□□ -0.34
Col2a1P28481 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Col2a1P28481 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col2a1P28481 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.95□□□□□ -0.34
Col2a1P28481 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col2a1P28481 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.95□□□□□ -0.34
Col2a1P28481 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC12.95□□□□□ -0.34
Col2a1P28481 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col2a1P28481 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Col2a1P28481 Gm18201-201ENSMUST00000174735 875 ntBASIC12.95□□□□□ -0.34
Col2a1P28481 Gm18014-201ENSMUST00000183369 817 ntBASIC12.95□□□□□ -0.34
Col2a1P28481 Gm37365-201ENSMUST00000193109 409 ntBASIC12.95□□□□□ -0.34
Col2a1P28481 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.95□□□□□ -0.34
Col2a1P28481 Gm45388-201ENSMUST00000209922 1132 ntTSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col2a1P28481 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col2a1P28481 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Col2a1P28481 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Col2a1P28481 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms