Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC9□□□□□ -0.97
Ccl6P27784 Gm14277-201ENSMUST00000121195 360 ntBASIC9□□□□□ -0.97
Ccl6P27784 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9□□□□□ -0.97
Ccl6P27784 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9□□□□□ -0.97
Ccl6P27784 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC9□□□□□ -0.97
Ccl6P27784 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Gm4310-201ENSMUST00000177847 889 ntBASIC9□□□□□ -0.97
Ccl6P27784 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Gm2260-201ENSMUST00000184965 657 ntBASIC9□□□□□ -0.97
Ccl6P27784 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Rps4l-202ENSMUST00000204242 789 ntBASIC9□□□□□ -0.97
Ccl6P27784 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Gm2553-201ENSMUST00000215986 605 ntBASIC9□□□□□ -0.97
Ccl6P27784 CT485787.1-201ENSMUST00000225617 968 ntBASIC9□□□□□ -0.97
Ccl6P27784 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC9□□□□□ -0.97
Ccl6P27784 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Ccl6P27784 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC9□□□□□ -0.97
Ccl6P27784 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm43242-201ENSMUST00000199507 1776 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm23596-201ENSMUST00000104304 132 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccl6P27784 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccl6P27784 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm8343-201ENSMUST00000182705 994 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 Gm3332-201ENSMUST00000189337 928 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 Gstp-ps-201ENSMUST00000195526 631 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 Gm18038-201ENSMUST00000197900 485 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 AC113082.1-201ENSMUST00000217324 327 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 CT573034.1-201ENSMUST00000222983 313 ntBASIC8.99□□□□□ -0.97
Ccl6P27784 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Ccl6P27784 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Ccl6P27784 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Ccl6P27784 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC8.98□□□□□ -0.97
Ccl6P27784 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC8.98□□□□□ -0.97
Ccl6P27784 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Ccl6P27784 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms