Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tmem63a-201ENSMUST00000027800 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.51□□□□□ -0.73
Cbx3P23198 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC10.51□□□□□ -0.73
Cbx3P23198 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.51□□□□□ -0.73
Cbx3P23198 Gm26185-201ENSMUST00000157692 266 ntBASIC10.51□□□□□ -0.73
Cbx3P23198 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC10.51□□□□□ -0.73
Cbx3P23198 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Cbx3P23198 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC10.51□□□□□ -0.73
Cbx3P23198 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.51□□□□□ -0.73
Cbx3P23198 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.51□□□□□ -0.73
Cbx3P23198 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.51□□□□□ -0.73
Cbx3P23198 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.51□□□□□ -0.73
Cbx3P23198 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.51□□□□□ -0.73
Cbx3P23198 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cbx3P23198 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Cbx3P23198 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Dis3l2-202ENSMUST00000168237 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.51□□□□□ -0.73
Cbx3P23198 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Cbx3P23198 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Aen-203ENSMUST00000107425 4956 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Cbx3P23198 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.5□□□□□ -0.73
Cbx3P23198 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Kir3dl2-201ENSMUST00000072125 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Ctnnd1-223ENSMUST00000111697 5294 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm42460-201ENSMUST00000198863 2567 ntBASIC10.5□□□□□ -0.73
Cbx3P23198 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm9361-201ENSMUST00000198695 1507 ntBASIC10.5□□□□□ -0.73
Cbx3P23198 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Cbx3P23198 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm11918-201ENSMUST00000121660 179 ntBASIC10.5□□□□□ -0.73
Cbx3P23198 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Cbx3P23198 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm17794-201ENSMUST00000220252 955 ntBASIC10.5□□□□□ -0.73
Cbx3P23198 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Gm16478-201ENSMUST00000208113 5084 ntBASIC10.5□□□□□ -0.73
Cbx3P23198 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Acad10-202ENSMUST00000111770 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Cbx3P23198 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Cbx3P23198 Pex2-203ENSMUST00000164828 2051 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Cbx3P23198 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Cbx3P23198 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.49□□□□□ -0.73
Cbx3P23198 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Gm26511-201ENSMUST00000181400 1895 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Foxm1-202ENSMUST00000112148 2229 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Cbx3P23198 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Cbx3P23198 Unc13d-209ENSMUST00000174822 3337 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms