Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
BdnfP21237 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.13□□□□□ -0.63
BdnfP21237 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Gm12015-201ENSMUST00000117065 843 ntBASIC11.13□□□□□ -0.63
BdnfP21237 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
BdnfP21237 Gm45865-201ENSMUST00000211815 945 ntBASIC11.13□□□□□ -0.63
BdnfP21237 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.13□□□□□ -0.63
BdnfP21237 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.13□□□□□ -0.63
BdnfP21237 Cts7-204ENSMUST00000225321 1257 ntBASIC11.13□□□□□ -0.63
BdnfP21237 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 AC154314.2-201ENSMUST00000223677 3502 ntBASIC11.13□□□□□ -0.63
BdnfP21237 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.13□□□□□ -0.63
BdnfP21237 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
BdnfP21237 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
BdnfP21237 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.12□□□□□ -0.63
BdnfP21237 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.12□□□□□ -0.63
BdnfP21237 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Gm11930-201ENSMUST00000117788 190 ntBASIC11.12□□□□□ -0.63
BdnfP21237 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Gm6963-201ENSMUST00000147879 379 ntBASIC11.12□□□□□ -0.63
BdnfP21237 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.12□□□□□ -0.63
BdnfP21237 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11.12□□□□□ -0.63
BdnfP21237 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.12□□□□□ -0.63
BdnfP21237 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC11.12□□□□□ -0.63
BdnfP21237 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
BdnfP21237 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
BdnfP21237 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
BdnfP21237 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
BdnfP21237 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.11□□□□□ -0.63
BdnfP21237 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
BdnfP21237 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.11□□□□□ -0.63
BdnfP21237 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms